| Constituent units | Doctoral program |
|---|---|
| Faculty of Economics and Business | Economy and Business Economy: – Field: Economy – Field: Business Economy |
| Faculty of Informatics and Digital Technologies | Doctoral Program in Informatics |
| Faculty of Physics | Doctoral Program in Physics |
| Faculty of Mathematics | Doctoral Program in Mathematics * The program is conducted at the Faculty of Mathematics, while its coordinating institution is the Department of Mathematics, Faculty of Science, University of Zagreb. |
| Faculty of Tourism and Hospitality Management | – Management of Sustainable Development – Business Economics in Tourism and Hospitality Industry |
| Faculty of Humanities and Social Sciences | – Philosophy and Contemporaneity – History and Dialectology of the Croatian Language – Pedagogy – Psychology |
| Faculty of Civil Engineering | Doctoral Program in Civil Engineering |
| Faculty of Medicine | Doctoral programs in the field of biomedicine and health: – Biomedicine – Clinical medicine – Dental medicine – Public health – Health and environmental engineering |
| Faculty of Biotechnology and Drug Development | Doctoral Program Medicinal Chemistry |
| Faculty of Maritime Studies | Doctoral Program in Maritime Studies |
| Faculty of Law | Doctoral Program in the Field of Social Sciences, the Subject of Law |
| Faculty of Engineering | Doctoral program in the field of technical sciences: – Mechanical Engineering – Shipbuilding – Fundamental Technical Sciences – Interdisciplinary Technical Sciences – Electrical engineering – Computer science |